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  5. Solyc04g015450.3.1

Solyc04g015450.3.1


Description : Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa (sp|b9gha6|gufp_poptr : 1077.0)


Gene families : OG0002075 (Archaeplastida) Phylogenetic Tree(s): OG0002075_tree ,
OG_05_0002240 (LandPlants) Phylogenetic Tree(s): OG_05_0002240_tree ,
OG_06_0002589 (SeedPlants) Phylogenetic Tree(s): OG_06_0002589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g015450.3.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00109510 evm_27.TU.AmTr_v1... Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera 0.09 Archaeplastida
AT5G08650 No alias Small GTP-binding protein 0.21 Archaeplastida
Cpa|evm.model.tig00000912.22 No alias Translation factor GUF1 homolog, chloroplastic... 0.03 Archaeplastida
Cpa|evm.model.tig00021127.140 No alias Translation factor GUF1 homolog, mitochondrial OS=Sorghum bicolor 0.02 Archaeplastida
Cre03.g165000 No alias Translation factor GUF1 homolog, chloroplastic... 0.04 Archaeplastida
GSVIVT01022409001 No alias Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera 0.21 Archaeplastida
LOC_Os02g06300.1 No alias Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.22 Archaeplastida
Mp7g18810.1 No alias Translation factor GUF1 homolog, chloroplastic OS=Vitis... 0.08 Archaeplastida
Pp3c26_13410V3.1 No alias Small GTP-binding protein 0.11 Archaeplastida
Smo407721 No alias Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.06 Archaeplastida
Zm00001e025200_P002 No alias Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.15 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006536 glutamate metabolic process IEP Neighborhood
BP GO:0006537 glutamate biosynthetic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0015930 glutamate synthase activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013842 LepA_CTD 569 675
IPR004161 EFTu-like_2 286 356
IPR000640 EFG_V-like 480 566
IPR000795 TF_GTP-bd_dom 85 262
No external refs found!