Solyc04g049800.3.1

Description : transcription factor (AP2)

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000603 (LandPlants) Phylogenetic Tree(s): OG_05_0000603_tree ,
OG_06_0000543 (SeedPlants) Phylogenetic Tree(s): OG_06_0000543_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g049800.3.1
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00086450	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00024p00227390	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00035p00205430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00101p00022740	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G16060	ADAP	ARIA-interacting double AP2 domain protein	0.06	Archaeplastida
AT3G54320	WRI1, ATWRI1, ASML1, WRI	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT3G54990	SMZ	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G57390	AIL5, EMK, CHO1	AINTEGUMENTA-like 5	0.03	Archaeplastida
GSVIVT01020066001	No alias	External stimuli response.biotic...	0.04	Archaeplastida
Gb_33988	No alias	transcription factor (AP2)	0.05	Archaeplastida
LOC_Os03g12950.1	No alias	no description available(sp\|q84z02\|crl5_orysj : 102.0)	0.02	Archaeplastida
LOC_Os03g19900.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os04g55560.2	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os05g03040.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os08g34360.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_10434312g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_2193g0020	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_639835g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_75070g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_8090186g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_95471g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
Mp8g11450.1	No alias	transcription factor (AP2)	0.01	Archaeplastida
Pp3c10_24550V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c23_13360V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c5_2780V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c9_25400V3.1	No alias	AINTEGUMENTA-like 5	0.02	Archaeplastida
Pp3c9_25570V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc01g096860.3.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc03g117720.3.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
Solyc07g018290.4.1	No alias	transcription factor (AP2)	0.07	Archaeplastida
Zm00001e000558_P003	No alias	transcription factor (AP2)	0.05	Archaeplastida
Zm00001e006704_P001	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e029525_P003	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e037501_P005	No alias	transcription factor (AP2)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	111	160

External Links

No external refs found!

Solyc04g049800.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation