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  5. Solyc04g070990.4.1

Solyc04g070990.4.1


Description : no hits & (original description: none)


Gene families : OG0001085 (Archaeplastida) Phylogenetic Tree(s): OG0001085_tree ,
OG_05_0000943 (LandPlants) Phylogenetic Tree(s): OG_05_0000943_tree ,
OG_06_0002303 (SeedPlants) Phylogenetic Tree(s): OG_06_0002303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g070990.4.1
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00102010 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
GSVIVT01024330001 No alias No description available 0.03 Archaeplastida
LOC_Os11g18770.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g24540.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_175822g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c5_28530V3.1 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 Archaeplastida
Pp3c6_1100V3.1 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Archaeplastida
Smo439529 No alias No description available 0.02 Archaeplastida
Zm00001e002445_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e029823_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
CC GO:0035658 Mon1-Ccz1 complex IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003656 Znf_BED 200 250
IPR003656 Znf_BED 299 349
No external refs found!