1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00025p00044700

AMTR_s00025p00044700 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.23

Description : Solute transport.channels.QUAC/ALMT anion channel


Gene families : OG0000308 (Archaeplastida) Phylogenetic Tree(s): OG0000308_tree ,
OG_05_0000168 (LandPlants) Phylogenetic Tree(s): OG_05_0000168_tree ,
OG_06_0000261 (SeedPlants) Phylogenetic Tree(s): OG_06_0000261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00044700
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00178130 evm_27.TU.AmTr_v1... Solute transport.channels.QUAC/ALMT anion channel 0.04 Archaeplastida
AMTR_s00069p00044130 evm_27.TU.AmTr_v1... Solute transport.channels.QUAC/ALMT anion channel 0.04 Archaeplastida
AMTR_s00125p00116990 evm_27.TU.AmTr_v1... Solute transport.channels.QUAC/ALMT anion channel 0.04 Archaeplastida
GSVIVT01019447001 No alias Solute transport.channels.QUAC/ALMT anion channel 0.01 Archaeplastida
GSVIVT01019627001 No alias Solute transport.channels.QUAC/ALMT anion channel 0.04 Archaeplastida
GSVIVT01027186001 No alias Solute transport.channels.QUAC/ALMT anion channel 0.03 Archaeplastida
Gb_03302 No alias anion channel (QUAC/ALMT) 0.02 Archaeplastida
Gb_16081 No alias anion channel (QUAC/ALMT) 0.02 Archaeplastida
Gb_16082 No alias anion channel (QUAC/ALMT) 0.03 Archaeplastida
LOC_Os02g45160.1 No alias anion channel (QUAC/ALMT) 0.03 Archaeplastida
MA_10203413g0010 No alias anion channel (QUAC/ALMT) 0.02 Archaeplastida
MA_959589g0010 No alias anion channel (QUAC/ALMT) 0.03 Archaeplastida
Solyc01g096140.3.1 No alias anion channel (QUAC/ALMT) 0.03 Archaeplastida
Solyc03g096820.4.1 No alias anion channel (QUAC/ALMT) 0.04 Archaeplastida
Solyc06g061100.4.1 No alias anion channel (QUAC/ALMT) 0.02 Archaeplastida
Zm00001e008168_P001 No alias anion channel (QUAC/ALMT) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0015743 malate transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR020966 ALMT 33 430
No external refs found!