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  5. Solyc04g072890.4.1

Solyc04g072890.4.1


Description : no hits & (original description: none)


Gene families : OG0001171 (Archaeplastida) Phylogenetic Tree(s): OG0001171_tree ,
OG_05_0001325 (LandPlants) Phylogenetic Tree(s): OG_05_0001325_tree ,
OG_06_0001016 (SeedPlants) Phylogenetic Tree(s): OG_06_0001016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g072890.4.1
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g26870.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g07540.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c10_22840V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Pp3c3_27480V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
Solyc12g098690.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004061 arylformamidase activity IEP Neighborhood
MF GO:0004096 catalase activity IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005534 galactose binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006569 tryptophan catabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042436 indole-containing compound catabolic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0046218 indolalkylamine catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048029 monosaccharide binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070189 kynurenine metabolic process IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 313 350
No external refs found!