1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g077850.3.1

Solyc04g077850.3.1


Description : U-box domain-containing protein 4 OS=Arabidopsis thaliana (sp|o22193|pub4_arath : 261.0)


Gene families : OG0003211 (Archaeplastida) Phylogenetic Tree(s): OG0003211_tree ,
OG_05_0002427 (LandPlants) Phylogenetic Tree(s): OG_05_0002427_tree ,
OG_06_0001492 (SeedPlants) Phylogenetic Tree(s): OG_06_0001492_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g077850.3.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00145690 evm_27.TU.AmTr_v1... U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00086p00031680 evm_27.TU.AmTr_v1... U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01009347001 No alias U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e035391_P001 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e035415_P001 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000225 Armadillo 175 213
IPR000225 Armadillo 133 171
IPR000225 Armadillo 92 130
No external refs found!