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  5. Solyc04g077990.3.1

Solyc04g077990.3.1


Description : transcription factor (AS2/LOB)


Gene families : OG0000724 (Archaeplastida) Phylogenetic Tree(s): OG0000724_tree ,
OG_05_0000483 (LandPlants) Phylogenetic Tree(s): OG_05_0000483_tree ,
OG_06_0000437 (SeedPlants) Phylogenetic Tree(s): OG_06_0000437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g077990.3.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00051070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
AMTR_s00137p00087340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.07 Archaeplastida
AT1G68510 LBD42 LOB domain-containing protein 42 0.03 Archaeplastida
AT5G67420 LBD37, ASL39 LOB domain-containing protein 37 0.03 Archaeplastida
GSVIVT01000141001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
GSVIVT01011896001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01031035001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
Gb_36943 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
LOC_Os01g20800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_223267g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_70989g0010 No alias transcription factor (AS2/LOB) 0.07 Archaeplastida
MA_75731g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Pp3c6_26790V3.1 No alias LOB domain-containing protein 37 0.03 Archaeplastida
Zm00001e001981_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e005129_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e032150_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 2 101
No external refs found!