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  5. Solyc04g078190.4.1

Solyc04g078190.4.1


Description : no hits & (original description: none)


Gene families : OG0001241 (Archaeplastida) Phylogenetic Tree(s): OG0001241_tree ,
OG_05_0000931 (LandPlants) Phylogenetic Tree(s): OG_05_0000931_tree ,
OG_06_0000897 (SeedPlants) Phylogenetic Tree(s): OG_06_0000897_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g078190.4.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00115060 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
GSVIVT01009382001 No alias No description available 0.04 Archaeplastida
LOC_Os12g39160.1 No alias GTPase effector (BDR) 0.02 Archaeplastida
MA_133920g0010 No alias GTPase effector (BDR) 0.06 Archaeplastida
Zm00001e035436_P001 No alias GTPase effector (BDR) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR006873 DUF620 172 258
No external refs found!