1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g078210.3.1

Solyc04g078210.3.1


Description : Pumilio homolog 12 OS=Arabidopsis thaliana (sp|q9lvc3|pum12_arath : 241.0)


Gene families : OG0000536 (Archaeplastida) Phylogenetic Tree(s): OG0000536_tree ,
OG_05_0108699 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0086498 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g078210.3.1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
MA_42218g0010 No alias Pumilio homolog 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c12_22620V3.1 No alias pumilio 5 0.01 Archaeplastida
Pp3c8_2770V3.1 No alias pumilio 1 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 385 407
IPR001313 Pumilio_RNA-bd_rpt 422 445
IPR001313 Pumilio_RNA-bd_rpt 244 271
No external refs found!