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  5. Solyc04g079960.1.1

Solyc04g079960.1.1


Description : catalytic subunit of geranyl diphosphate synthase complex. isoprenyl diphosphate synthase


Gene families : OG0000728 (Archaeplastida) Phylogenetic Tree(s): OG0000728_tree ,
OG_05_0001040 (LandPlants) Phylogenetic Tree(s): OG_05_0001040_tree ,
OG_06_0001095 (SeedPlants) Phylogenetic Tree(s): OG_06_0001095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g079960.1.1
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AT1G49530 GGPS6 geranylgeranyl pyrophosphate synthase 6 0.05 Archaeplastida
AT2G18620 No alias Terpenoid synthases superfamily protein 0.03 Archaeplastida
Gb_21550 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
Gb_27154 No alias Geranylgeranyl pyrophosphate synthase,... 0.02 Archaeplastida
LOC_Os01g14630.1 No alias isoprenyl diphosphate synthase 0.05 Archaeplastida
LOC_Os02g44780.1 No alias regulatory subunit of geranyl diphosphate synthase... 0.02 Archaeplastida
LOC_Os07g39270.1 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_138828g0010 No alias isoprenyl diphosphate synthase 0.03 Archaeplastida
MA_888237g0010 No alias isoprenyl diphosphate synthase 0.04 Archaeplastida
MA_895626g0010 No alias isoprenyl diphosphate synthase 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0004575 sucrose alpha-glucosidase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0015926 glucosidase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0090599 alpha-glucosidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 98 327
No external refs found!