Solyc04g080120.1.1


Description : Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana (sp|q9sxd1|ppr91_arath : 365.0)


Gene families : OG0013662 (Archaeplastida) Phylogenetic Tree(s): OG0013662_tree ,
OG_05_0013460 (LandPlants) Phylogenetic Tree(s): OG_05_0013460_tree ,
OG_06_0013457 (SeedPlants) Phylogenetic Tree(s): OG_06_0013457_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g080120.1.1
Cluster HCCA: Cluster_229


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0015939 pantothenate metabolic process IEP Neighborhood
BP GO:0015940 pantothenate biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 228 277
IPR002885 Pentatricopeptide_repeat 369 415
IPR002885 Pentatricopeptide_repeat 295 326
IPR002885 Pentatricopeptide_repeat 505 537
IPR002885 Pentatricopeptide_repeat 329 362
IPR002885 Pentatricopeptide_repeat 547 576
IPR002885 Pentatricopeptide_repeat 196 223
IPR002885 Pentatricopeptide_repeat 160 189
IPR002885 Pentatricopeptide_repeat 441 468
No external refs found!