1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g080360.4.1

Solyc04g080360.4.1


Description : Probable methyltransferase PMT28 OS=Arabidopsis thaliana (sp|q9ln50|pmts_arath : 828.0)


Gene families : OG0001029 (Archaeplastida) Phylogenetic Tree(s): OG0001029_tree ,
OG_05_0000619 (LandPlants) Phylogenetic Tree(s): OG_05_0000619_tree ,
OG_06_0000806 (SeedPlants) Phylogenetic Tree(s): OG_06_0000806_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g080360.4.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT1G19430 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.07 Archaeplastida
AT1G29470 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.12 Archaeplastida
AT5G64030 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.06 Archaeplastida
GSVIVT01026451001 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01032763001 No alias Probable methyltransferase PMT23 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_16057 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_34663 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g66110.1 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g56380.1 No alias Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Mp7g04590.1 No alias Probable methyltransferase PMT24 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c15_10250V3.1 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 Archaeplastida
Pp3c4_11900V3.1 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 Archaeplastida
Smo140935 No alias Probable methyltransferase PMT27 OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e005847_P001 No alias Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e007514_P001 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 285 773
No external refs found!