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  5. Solyc04g080700.4.1

Solyc04g080700.4.1


Description : Bifunctional nuclease 2 OS=Arabidopsis thaliana (sp|q93vh2|bbd2_arath : 421.0)


Gene families : OG0001711 (Archaeplastida) Phylogenetic Tree(s): OG0001711_tree ,
OG_05_0001348 (LandPlants) Phylogenetic Tree(s): OG_05_0001348_tree ,
OG_06_0003815 (SeedPlants) Phylogenetic Tree(s): OG_06_0003815_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g080700.4.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00133450 evm_27.TU.AmTr_v1... Bifunctional nuclease 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G19660 No alias Wound-responsive family protein 0.04 Archaeplastida
AT1G75380 BBD1, ATBBD1 bifunctional nuclease in basal defense response 1 0.1 Archaeplastida
Cre16.g688302 No alias No description available 0.01 Archaeplastida
GSVIVT01009760001 No alias Bifunctional nuclease 2 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_36898 No alias Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os01g50622.1 No alias Bifunctional nuclease 1 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os08g26870.1 No alias Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.09 Archaeplastida
Mp1g11770.1 No alias Bifunctional nuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c1_7540V3.1 No alias Wound-responsive family protein 0.03 Archaeplastida
Pp3c20_10270V3.1 No alias bifunctional nuclease in basal defense response 1 0.03 Archaeplastida
Pp3c2_32990V3.1 No alias Wound-responsive family protein 0.02 Archaeplastida
Pp3c2_9900V3.1 No alias bifunctional nuclease in basal defense response 1 0.03 Archaeplastida
Zm00001e018013_P001 No alias Bifunctional nuclease 1 OS=Oryza sativa subsp. indica... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0047746 chlorophyllase activity IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003729 Bi_nuclease_dom 135 248
No external refs found!