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  5. Solyc04g080810.4.1

Solyc04g080810.4.1


Description : Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana (sp|q9fwt2|ubc16_arath : 267.0)


Gene families : OG0002269 (Archaeplastida) Phylogenetic Tree(s): OG0002269_tree ,
OG_05_0002124 (LandPlants) Phylogenetic Tree(s): OG_05_0002124_tree ,
OG_06_0002060 (SeedPlants) Phylogenetic Tree(s): OG_06_0002060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g080810.4.1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Gb_19350 No alias Probable ubiquitin-conjugating enzyme E2 16... 0.02 Archaeplastida
LOC_Os03g47770.1 No alias Probable ubiquitin-conjugating enzyme E2 16... 0.03 Archaeplastida
LOC_Os12g44000.1 No alias Probable ubiquitin-conjugating enzyme E2 18... 0.03 Archaeplastida
MA_132866g0010 No alias Probable ubiquitin-conjugating enzyme E2 16... 0.05 Archaeplastida
MA_306852g0010 No alias Probable ubiquitin-conjugating enzyme E2 16... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Neighborhood
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0007033 vacuole organization IEP Neighborhood
MF GO:0008531 riboflavin kinase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1905037 autophagosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 19 154
No external refs found!