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  5. Solyc04g082110.4.1

Solyc04g082110.4.1


Description : PRONE-type RopGEF guanine nucleotide exchange factor


Gene families : OG0000251 (Archaeplastida) Phylogenetic Tree(s): OG0000251_tree ,
OG_05_0000833 (LandPlants) Phylogenetic Tree(s): OG_05_0000833_tree ,
OG_06_0001817 (SeedPlants) Phylogenetic Tree(s): OG_06_0001817_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g082110.4.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00249740 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.05 Archaeplastida
AMTR_s00011p00264790 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.05 Archaeplastida
AT1G31650 ROPGEF14, ATROPGEF14 RHO guanyl-nucleotide exchange factor 14 0.04 Archaeplastida
AT4G38430 ATROPGEF1, ROPGEF1 rho guanyl-nucleotide exchange factor 1 0.05 Archaeplastida
AT5G02010 ROPGEF7, ATROPGEF7 RHO guanyl-nucleotide exchange factor 7 0.02 Archaeplastida
GSVIVT01023897001 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 Archaeplastida
GSVIVT01034063001 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 Archaeplastida
Gb_14425 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.05 Archaeplastida
Gb_24552 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
LOC_Os01g62990.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
LOC_Os02g47420.3 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
LOC_Os04g47170.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
LOC_Os09g37270.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.06 Archaeplastida
LOC_Os10g40270.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
MA_10311111g0010 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
MA_2791g0010 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
MA_66695g0010 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
MA_7016387g0010 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
Pp3c2_4460V3.1 No alias RHO guanyl-nucleotide exchange factor 7 0.04 Archaeplastida
Solyc01g111930.4.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.05 Archaeplastida
Zm00001e010284_P002 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Zm00001e015569_P002 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.06 Archaeplastida
Zm00001e024760_P001 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Zm00001e034952_P003 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Zm00001e034978_P001 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005512 PRONE_dom 96 436
No external refs found!