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  5. Solyc04g082160.4.1

Solyc04g082160.4.1


Description : no description available(sp|d5lxj0|cip73_lotja : 145.0)


Gene families : OG0002230 (Archaeplastida) Phylogenetic Tree(s): OG0002230_tree ,
OG_05_0002294 (LandPlants) Phylogenetic Tree(s): OG_05_0002294_tree ,
OG_06_0001812 (SeedPlants) Phylogenetic Tree(s): OG_06_0001812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g082160.4.1
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00156850 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
GSVIVT01029432001 No alias No description available 0.04 Archaeplastida
Pp3c2_12670V3.1 No alias Ubiquitin-like superfamily protein 0.03 Archaeplastida
Smo403529 No alias No description available 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 26 96
No external refs found!