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  4. Sequence
  5. Solyc04g150169.1.1

Solyc04g150169.1.1


Description : no hits & (original description: none)


Gene families : OG0000375 (Archaeplastida) Phylogenetic Tree(s): OG0000375_tree ,
OG_05_0000187 (LandPlants) Phylogenetic Tree(s): OG_05_0000187_tree ,
OG_06_0000080 (SeedPlants) Phylogenetic Tree(s): OG_06_0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g150169.1.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Solyc01g010175.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g061225.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc09g065525.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc10g044988.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc12g019235.1.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!