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  5. Solyc05g005550.4.1

Solyc05g005550.4.1


Description : non-catalytic polygalacturonase regulator


Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree ,
OG_06_0001066 (SeedPlants) Phylogenetic Tree(s): OG_06_0001066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g005550.4.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT1G23760 JP630, PG3 BURP domain-containing protein 0.03 Archaeplastida
AT1G70370 PG2 polygalacturonase 2 0.02 Archaeplastida
AT5G25610 ATRD22, RD22 BURP domain-containing protein 0.04 Archaeplastida
Gb_32942 No alias non-catalytic polygalacturonase regulator 0.04 Archaeplastida
LOC_Os08g29200.1 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
MA_8166396g0010 No alias BURP domain-containing protein 1 OS=Oryza sativa subsp.... 0.07 Archaeplastida
Pp3c13_16030V3.1 No alias polygalacturonase 2 0.02 Archaeplastida
Zm00001e003182_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029096_P002 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004873 BURP_dom 176 388
No external refs found!