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  5. Solyc05g006340.3.1

Solyc05g006340.3.1


Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 243.0)


Gene families : OG0000380 (Archaeplastida) Phylogenetic Tree(s): OG0000380_tree ,
OG_05_0000225 (LandPlants) Phylogenetic Tree(s): OG_05_0000225_tree ,
OG_06_0000140 (SeedPlants) Phylogenetic Tree(s): OG_06_0000140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g006340.3.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_14478 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g40260.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_913477g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 Archaeplastida
Smo66275 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0004061 arylformamidase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006569 tryptophan catabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042436 indole-containing compound catabolic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046218 indolalkylamine catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0070189 kynurenine metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 359 411
IPR001680 WD40_repeat 272 306
IPR001680 WD40_repeat 228 260
IPR001680 WD40_repeat 187 217
IPR001680 WD40_repeat 320 350
No external refs found!