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  5. Solyc05g008080.3.1

Solyc05g008080.3.1


Description : Nodulin-26-like intrinsic protein (NIP)


Gene families : OG0000026 (Archaeplastida) Phylogenetic Tree(s): OG0000026_tree ,
OG_05_0000928 (LandPlants) Phylogenetic Tree(s): OG_05_0000928_tree ,
OG_06_0001663 (SeedPlants) Phylogenetic Tree(s): OG_06_0001663_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g008080.3.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00047680 evm_27.TU.AmTr_v1... Solute transport.channels.MIP family.tonoplast intrinsic... 0.03 Archaeplastida
AT2G45960 PIP1B, ATHH2,... plasma membrane intrinsic protein 1B 0.05 Archaeplastida
AT3G16240 ATTIP2;1,... delta tonoplast integral protein 0.04 Archaeplastida
GSVIVT01004850001 No alias Solute transport.channels.MIP family.Nodulin-26-like... 0.03 Archaeplastida
GSVIVT01011407001 No alias Solute transport.channels.MIP family.Nodulin-26-like... 0.06 Archaeplastida
GSVIVT01018189001 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.04 Archaeplastida
GSVIVT01018678001 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.05 Archaeplastida
GSVIVT01025681001 No alias Solute transport.channels.MIP family.plasma membrane... 0.04 Archaeplastida
GSVIVT01026944001 No alias Solute transport.channels.MIP family.plasma membrane... 0.04 Archaeplastida
LOC_Os02g13870.1 No alias Nodulin-26-like intrinsic protein (NIP) 0.05 Archaeplastida
LOC_Os04g16450.1 No alias plasma membrane intrinsic protein (PIP) 0.02 Archaeplastida
MA_101877g0010 No alias Nodulin-26-like intrinsic protein (NIP) 0.03 Archaeplastida
MA_467865g0010 No alias tonoplast intrinsic protein (TIP) 0.04 Archaeplastida
Pp3c3_31900V3.1 No alias plasma membrane intrinsic protein 2A 0.03 Archaeplastida
Smo165578 No alias Solute transport.channels.MIP family.Nodulin-26-like... 0.03 Archaeplastida
Solyc08g008045.1.1 No alias plasma membrane intrinsic protein (PIP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000425 MIP 37 244
No external refs found!