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  4. Sequence
  5. Solyc05g009360.4.1

Solyc05g009360.4.1


Description : no hits & (original description: none)


Gene families : OG0000921 (Archaeplastida) Phylogenetic Tree(s): OG0000921_tree ,
OG_05_0000686 (LandPlants) Phylogenetic Tree(s): OG_05_0000686_tree ,
OG_06_0000647 (SeedPlants) Phylogenetic Tree(s): OG_06_0000647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g009360.4.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00059200 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G68490 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 Archaeplastida
GSVIVT01008289001 No alias No description available 0.07 Archaeplastida
GSVIVT01011892001 No alias No description available 0.05 Archaeplastida
GSVIVT01031028001 No alias No description available 0.04 Archaeplastida
GSVIVT01032957001 No alias No description available 0.03 Archaeplastida
LOC_Os12g40840.3 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_75222g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8052g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c14_18120V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c17_20650V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c1_36180V3.1 No alias No annotation 0.03 Archaeplastida
Solyc02g086000.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g119480.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e018049_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027680_P002 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!