Solyc05g013540.1.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0086644 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g013540.1.1
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00266920	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00009p00147970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00010p00240320	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor FZP OS=Oryza...	0.04	Archaeplastida
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00021p00184450	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00034p00206140	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00040p00180260	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00069p00132820	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00095p00096190	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G04370	ERF14, ATERF14	Ethylene-responsive element binding factor 14	0.03	Archaeplastida
AT1G24590	DRN-LIKE, ESR2,...	DORNROSCHEN-like	0.05	Archaeplastida
AT1G80580	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G31060	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G11590	TINY2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
GSVIVT01017572001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01031387001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01031388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01035098001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Gb_11793	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_16683	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_17122	No alias	transcription factor (DREB)	0.05	Archaeplastida
Gb_23870	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_29220	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_35015	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_35633	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os01g10370.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os02g38090.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os03g07830.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
LOC_Os03g64260.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os04g32620.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g34730.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os06g11940.1	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
LOC_Os08g31580.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os08g44960.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os10g25170.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10432141g0010	No alias	no hits & (original description: none)	0.09	Archaeplastida
MA_40338g0010	No alias	Ethylene-responsive transcription factor ERF012...	0.06	Archaeplastida
MA_425410g0010	No alias	Ethylene-responsive transcription factor RAP2-13...	0.03	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp7g13760.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.03	Archaeplastida
Pp3c6_28370V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Solyc01g090560.4.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Solyc01g091760.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida
Solyc02g067020.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Solyc08g066660.1.1	No alias	transcription factor (DREB)	0.07	Archaeplastida
Solyc11g011750.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e019026_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e023686_P001	No alias	transcription factor (ERF)	0.06	Archaeplastida
Zm00001e023816_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e026573_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e027351_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e032032_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e035811_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e038525_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.04	Archaeplastida
Zm00001e040033_P001	No alias	No annotation	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	50	99

External Links

No external refs found!

Solyc05g013540.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation