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  5. Solyc05g013617.1.1

Solyc05g013617.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 102.0)


Gene families : OG0000177 (Archaeplastida) Phylogenetic Tree(s): OG0000177_tree ,
OG_05_0000071 (LandPlants) Phylogenetic Tree(s): OG_05_0000071_tree ,
OG_06_0000026 (SeedPlants) Phylogenetic Tree(s): OG_06_0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g013617.1.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500094.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc01g014963.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc01g106575.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Solyc01g150141.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Solyc02g024045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida
Solyc03g062835.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc04g150127.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g048713.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Solyc06g053665.1.1 No alias No annotation 0.08 Archaeplastida
Solyc06g066853.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 Archaeplastida
Solyc08g062725.1.1 No alias No annotation 0.02 Archaeplastida
Solyc10g018203.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc10g074433.1.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc10g074475.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 Archaeplastida
Solyc12g042855.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!