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  5. Solyc05g013820.4.1

Solyc05g013820.4.1


Description : component beta type-2 of 26S proteasome


Gene families : OG0004382 (Archaeplastida) Phylogenetic Tree(s): OG0004382_tree ,
OG_05_0005872 (LandPlants) Phylogenetic Tree(s): OG_05_0005872_tree ,
OG_06_0006975 (SeedPlants) Phylogenetic Tree(s): OG_06_0006975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g013820.4.1
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
AT5G40580 PBB2 20S proteasome beta subunit PBB2 0.04 Archaeplastida
Cre10.g424400 No alias Protein degradation.26S proteasome.20S core... 0.18 Archaeplastida
GSVIVT01000574001 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
LOC_Os05g09490.1 No alias component beta type-2 of 26S proteasome 0.19 Archaeplastida
MA_10436996g0010 No alias component beta type-2 of 26S proteasome 0.11 Archaeplastida
Mp1g03530.1 No alias component beta type-2 of 26S proteasome 0.1 Archaeplastida
Pp3c6_26530V3.1 No alias 20S proteasome beta subunit PBB2 0.1 Archaeplastida
Smo149251 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
Zm00001e029814_P002 No alias component beta type-2 of 26S proteasome 0.15 Archaeplastida
Zm00001e033186_P001 No alias component beta type-2 of 26S proteasome 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006448 regulation of translational elongation IEP Neighborhood
BP GO:0006449 regulation of translational termination IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
MF GO:0043022 ribosome binding IEP Neighborhood
BP GO:0043243 positive regulation of protein complex disassembly IEP Neighborhood
BP GO:0043244 regulation of protein complex disassembly IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045727 positive regulation of translation IEP Neighborhood
BP GO:0045901 positive regulation of translational elongation IEP Neighborhood
BP GO:0045905 positive regulation of translational termination IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051247 positive regulation of protein metabolic process IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 35 215
No external refs found!