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  5. Solyc05g014590.3.1

Solyc05g014590.3.1


Description : transcription factor (bHLH)


Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0000297 (LandPlants) Phylogenetic Tree(s): OG_05_0000297_tree ,
OG_06_0001361 (SeedPlants) Phylogenetic Tree(s): OG_06_0001361_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g014590.3.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00170610 evm_27.TU.AmTr_v1... External stimuli response.temperature.ICE-CBF cold... 0.02 Archaeplastida
AMTR_s00100p00127110 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00102p00046460 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.reduction-based strategy... 0.01 Archaeplastida
AMTR_s00102p00056000 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.reduction-based strategy... 0.03 Archaeplastida
AT2G28160 ATBHLH029,... FER-like regulator of iron uptake 0.04 Archaeplastida
AT3G26744 ATICE1, ICE1, SCRM basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT4G29930 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G57150 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT5G65640 bHLH093 beta HLH protein 93 0.03 Archaeplastida
GSVIVT01009234001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01013744001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
GSVIVT01013745001 No alias Transcription factor bHLH90 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01023755001 No alias Transcription factor bHLH93 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01029311001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
Gb_05276 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_26391 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_26399 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_36380 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os02g02820.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os04g23440.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os04g23550.1 No alias transcription factor (bHLH) 0.11 Archaeplastida
LOC_Os10g39750.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_28638g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_439607g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_448849g0010 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.02 Archaeplastida
MA_63506g0010 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.05 Archaeplastida
Mp2g02460.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp4g04920.1 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.02 Archaeplastida
Mp8g06230.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c1_20960V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c3_15850V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
Pp3c8_18070V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Smo91237 No alias External stimuli response.temperature.ICE-CBF cold... 0.03 Archaeplastida
Solyc06g051550.4.1 No alias transcription factor (bHLH). iron uptake transcription factor FIT 0.04 Archaeplastida
Solyc12g088130.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e008393_P001 No alias transcription factor (bHLH). iron uptake transcription factor FIT 0.03 Archaeplastida
Zm00001e010525_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e040186_P002 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e040675_P003 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e040732_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0004788 thiamine diphosphokinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0030975 thiamine binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042357 thiamine diphosphate metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 47 91
No external refs found!