Solyc05g014830.3.1

Description : histone (H2A)

Gene families : OG0011926 (Archaeplastida) Phylogenetic Tree(s): OG0011926_tree ,
OG_05_0011749 (LandPlants) Phylogenetic Tree(s): OG_05_0011749_tree ,
OG_06_0011835 (SeedPlants) Phylogenetic Tree(s): OG_06_0011835_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g014830.3.1
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc05g014870.3.1	No alias	histone (H2A)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	92	125
IPR032454	Histone_H2A_C	249	282
IPR007125	Histone_H2A/H2B/H3	12	89
IPR007125	Histone_H2A/H2B/H3	179	246

External Links

No external refs found!