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  5. AMTR_s00025p00192620

AMTR_s00025p00192620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.238

No description available


Gene families : OG0000015 (Archaeplastida) Phylogenetic Tree(s): OG0000015_tree ,
OG_05_0000013 (LandPlants) Phylogenetic Tree(s): OG_05_0000013_tree ,
OG_06_0000016 (SeedPlants) Phylogenetic Tree(s): OG_06_0000016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00192620
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00191690 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AT1G17345 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT5G18050 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
AT5G18060 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
Gb_16163 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g51890.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g48850.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_105570g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_16043g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_194750g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_66619g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_677220g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_94838g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g062230.1.1 No alias Auxin-responsive protein SAUR50 OS=Helianthus annuus... 0.04 Archaeplastida
Solyc05g025920.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g056430.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g011650.1.1 No alias Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g011677.1.1 No alias Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc11g011720.1.1 No alias Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e034248_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041324_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR003676 SAUR_fam 22 116
No external refs found!