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  5. Solyc05g025600.1.1

Solyc05g025600.1.1


Description : component PsbX of PS-II complex


Gene families : OG0004571 (Archaeplastida) Phylogenetic Tree(s): OG0004571_tree ,
OG_05_0003712 (LandPlants) Phylogenetic Tree(s): OG_05_0003712_tree ,
OG_06_0005450 (SeedPlants) Phylogenetic Tree(s): OG_06_0005450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g025600.1.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00218080 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.14 Archaeplastida
AT2G06520 PSBX photosystem II subunit X 0.18 Archaeplastida
GSVIVT01035449001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.16 Archaeplastida
Gb_07296 No alias component PsbX of PS-II complex 0.11 Archaeplastida
Gb_14525 No alias component PsbX of PS-II complex 0.06 Archaeplastida
LOC_Os03g22370.1 No alias component PsbX of PS-II complex 0.19 Archaeplastida
LOC_Os07g47640.1 No alias component PsbX of PS-II complex 0.09 Archaeplastida
MA_464043g0010 No alias component PsbX of PS-II complex 0.08 Archaeplastida
MA_59693g0010 No alias component PsbX of PS-II complex 0.04 Archaeplastida
Mp6g21460.1 No alias component PsbX of PS-II complex 0.14 Archaeplastida
Pp3c11_23670V3.1 No alias photosystem II subunit X 0.08 Archaeplastida
Pp3c1_32200V3.1 No alias photosystem II subunit X 0.16 Archaeplastida
Pp3c5_17290V3.1 No alias photosystem II subunit X 0.11 Archaeplastida
Pp3c6_15360V3.1 No alias photosystem II subunit X 0.19 Archaeplastida
Zm00001e025856_P001 No alias component PsbX of PS-II complex 0.15 Archaeplastida
Zm00001e035834_P001 No alias component PsbX of PS-II complex 0.1 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR009518 PSII_PsbX 74 111
No external refs found!