AT1G42540 (GLR3.3, ATGLR3.3)

Aliases : GLR3.3, ATGLR3.3

Description : glutamate receptor 3.3

Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000436 (LandPlants) Phylogenetic Tree(s): OG_05_0000436_tree ,
OG_06_0000332 (SeedPlants) Phylogenetic Tree(s): OG_06_0000332_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G42540
Cluster	HCCA: Cluster_132

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00176450	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.06	Archaeplastida
AMTR_s00062p00056200	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.06	Archaeplastida
GSVIVT01022297001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
GSVIVT01033150001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
GSVIVT01033156001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005217	intracellular ligand-gated ion channel activity	ISS	Interproscan
MF	GO:0005261	cation channel activity	None	Extended
MF	GO:0005262	calcium channel activity	IMP	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006816	calcium ion transport	IMP	Interproscan
BP	GO:0006873	cellular ion homeostasis	None	Extended
BP	GO:0006874	cellular calcium ion homeostasis	NAS	Interproscan
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
MF	GO:0008066	glutamate receptor activity	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	NAS	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	IMP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010243	response to organonitrogen compound	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015085	calcium ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0030003	cellular cation homeostasis	RCA	Interproscan
MF	GO:0038023	signaling receptor activity	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0043200	response to amino acid	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0045087	innate immune response	IMP	Interproscan
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0050832	defense response to fungus	IMP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051704	multi-organism process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055074	calcium ion homeostasis	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070838	divalent metal ion transport	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071229	cellular response to acid chemical	None	Extended
BP	GO:0071230	cellular response to amino acid stimulus	IMP	Interproscan
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071417	cellular response to organonitrogen compound	None	Extended
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0072503	cellular divalent inorganic cation homeostasis	None	Extended
BP	GO:0072507	divalent inorganic cation homeostasis	None	Extended
BP	GO:0072511	divalent inorganic cation transport	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901699	cellular response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0000304	response to singlet oxygen	IEP	Neighborhood
MF	GO:0003729	mRNA binding	IEP	Neighborhood
MF	GO:0004871	obsolete signal transducer activity	IEP	Neighborhood
CC	GO:0005834	heterotrimeric G-protein complex	IEP	Neighborhood
CC	GO:0005856	cytoskeleton	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Neighborhood
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
BP	GO:0007584	response to nutrient	IEP	Neighborhood
BP	GO:0007602	phototransduction	IEP	Neighborhood
BP	GO:0008153	para-aminobenzoic acid biosynthetic process	IEP	Neighborhood
MF	GO:0008483	transaminase activity	IEP	Neighborhood
MF	GO:0009011	starch synthase activity	IEP	Neighborhood
BP	GO:0009110	vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	Neighborhood
CC	GO:0009507	chloroplast	IEP	Neighborhood
CC	GO:0009536	plastid	IEP	Neighborhood
BP	GO:0009581	detection of external stimulus	IEP	Neighborhood
BP	GO:0009582	detection of abiotic stimulus	IEP	Neighborhood
BP	GO:0009583	detection of light stimulus	IEP	Neighborhood
BP	GO:0009585	red, far-red light phototransduction	IEP	Neighborhood
BP	GO:0010017	red or far-red light signaling pathway	IEP	Neighborhood
BP	GO:0010021	amylopectin biosynthetic process	IEP	Neighborhood
BP	GO:0010039	response to iron ion	IEP	Neighborhood
BP	GO:0010099	regulation of photomorphogenesis	IEP	Neighborhood
BP	GO:0010100	negative regulation of photomorphogenesis	IEP	Neighborhood
BP	GO:0010191	mucilage metabolic process	IEP	Neighborhood
BP	GO:0010192	mucilage biosynthetic process	IEP	Neighborhood
BP	GO:0010264	myo-inositol hexakisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0010343	singlet oxygen-mediated programmed cell death	IEP	Neighborhood
BP	GO:0012501	programmed cell death	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016759	cellulose synthase activity	IEP	Neighborhood
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Neighborhood
MF	GO:0019992	diacylglycerol binding	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	IEP	Neighborhood
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0032386	regulation of intracellular transport	IEP	Neighborhood
BP	GO:0032880	regulation of protein localization	IEP	Neighborhood
BP	GO:0032958	inositol phosphate biosynthetic process	IEP	Neighborhood
BP	GO:0033157	regulation of intracellular protein transport	IEP	Neighborhood
BP	GO:0033517	myo-inositol hexakisphosphate metabolic process	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0036473	cell death in response to oxidative stress	IEP	Neighborhood
BP	GO:0042306	regulation of protein import into nucleus	IEP	Neighborhood
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Neighborhood
MF	GO:0042802	identical protein binding	IEP	Neighborhood
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
BP	GO:0046173	polyol biosynthetic process	IEP	Neighborhood
BP	GO:0046417	chorismate metabolic process	IEP	Neighborhood
BP	GO:0046482	para-aminobenzoic acid metabolic process	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
BP	GO:0046655	folic acid metabolic process	IEP	Neighborhood
BP	GO:0046656	folic acid biosynthetic process	IEP	Neighborhood
MF	GO:0046820	4-amino-4-deoxychorismate synthase activity	IEP	Neighborhood
BP	GO:0046822	regulation of nucleocytoplasmic transport	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
BP	GO:0048513	animal organ development	IEP	Neighborhood
BP	GO:0048572	short-day photoperiodism	IEP	Neighborhood
BP	GO:0048575	short-day photoperiodism, flowering	IEP	Neighborhood
BP	GO:0048580	regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048581	negative regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048585	negative regulation of response to stimulus	IEP	Neighborhood
BP	GO:0048608	reproductive structure development	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0051093	negative regulation of developmental process	IEP	Neighborhood
BP	GO:0051223	regulation of protein transport	IEP	Neighborhood
BP	GO:0051241	negative regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0055072	iron ion homeostasis	IEP	Neighborhood
BP	GO:0055076	transition metal ion homeostasis	IEP	Neighborhood
BP	GO:0060341	regulation of cellular localization	IEP	Neighborhood
BP	GO:0070201	regulation of establishment of protein localization	IEP	Neighborhood
BP	GO:0071478	cellular response to radiation	IEP	Neighborhood
BP	GO:0071482	cellular response to light stimulus	IEP	Neighborhood
BP	GO:0071489	cellular response to red or far red light	IEP	Neighborhood
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0090087	regulation of peptide transport	IEP	Neighborhood
BP	GO:0097468	programmed cell death in response to reactive oxygen species	IEP	Neighborhood
CC	GO:0098796	membrane protein complex	IEP	Neighborhood
CC	GO:0098797	plasma membrane protein complex	IEP	Neighborhood
BP	GO:1900180	regulation of protein localization to nucleus	IEP	Neighborhood
CC	GO:1902494	catalytic complex	IEP	Neighborhood
BP	GO:1903827	regulation of cellular protein localization	IEP	Neighborhood
BP	GO:1904589	regulation of protein import	IEP	Neighborhood
CC	GO:1905360	GTPase complex	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood
BP	GO:2000026	regulation of multicellular organismal development	IEP	Neighborhood
BP	GO:2000028	regulation of photoperiodism, flowering	IEP	Neighborhood
BP	GO:2000030	regulation of response to red or far red light	IEP	Neighborhood
BP	GO:2000896	amylopectin metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001638	Solute-binding_3/MltF_N	485	807
IPR001828	ANF_lig-bd_rcpt	47	405
IPR001320	Iontro_rcpt	808	840

External Links

No external refs found!

AT1G42540 (GLR3.3, ATGLR3.3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation