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  5. AMTR_s00025p00211260

AMTR_s00025p00211260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.280

Description : F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana


Gene families : OG0000825 (Archaeplastida) Phylogenetic Tree(s): OG0000825_tree ,
OG_05_0009272 (LandPlants) Phylogenetic Tree(s): OG_05_0009272_tree ,
OG_06_0019320 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00211260
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010443001 No alias F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_29211 No alias F-box/kelch-repeat protein At1g67480 OS=Arabidopsis... 0.02 Archaeplastida
MA_10040248g0010 No alias F-box/kelch-repeat protein At1g67480 OS=Arabidopsis... 0.03 Archaeplastida
MA_10051g0010 No alias F-box/kelch-repeat protein At1g67480 OS=Arabidopsis... 0.03 Archaeplastida
MA_137994g0010 No alias F-box/kelch-repeat protein At1g67480 OS=Arabidopsis... 0.03 Archaeplastida
Smo83069 No alias F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008430 selenium binding IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR006652 Kelch_1 183 226
No external refs found!