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  5. Solyc05g044490.3.1

Solyc05g044490.3.1


Description : Late blight resistance protein R1-A OS=Solanum demissum (sp|q8w1e0|r1a_solde : 392.0)


Gene families : OG0002833 (Archaeplastida) Phylogenetic Tree(s): OG0002833_tree ,
OG_05_0001906 (LandPlants) Phylogenetic Tree(s): OG_05_0001906_tree ,
OG_06_0001059 (SeedPlants) Phylogenetic Tree(s): OG_06_0001059_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g044490.3.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Solyc05g008650.1.1 No alias Putative late blight resistance protein homolog R1A-4... 0.05 Archaeplastida
Solyc05g009740.1.1 No alias Putative late blight resistance protein homolog R1A-6... 0.05 Archaeplastida
Solyc05g009760.3.1 No alias Putative late blight resistance protein homolog R1B-16... 0.06 Archaeplastida
Solyc05g043420.2.1 No alias Putative late blight resistance protein homolog R1B-17... 0.03 Archaeplastida
Solyc05g050430.2.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc05g054010.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc05g054020.3.1 No alias Putative late blight resistance protein homolog R1B-16... 0.06 Archaeplastida
Solyc06g064680.1.1 No alias Putative late blight resistance protein homolog R1B-12... 0.04 Archaeplastida
Solyc06g064720.1.1 No alias Putative late blight resistance protein homolog R1B-12... 0.03 Archaeplastida
Solyc06g064750.1.1 No alias Putative late blight resistance protein homolog R1B-12... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 141 380
No external refs found!