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  5. AMTR_s00025p00217510

AMTR_s00025p00217510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.296

Description : 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana


Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0007213 (LandPlants) Phylogenetic Tree(s): OG_05_0007213_tree ,
OG_06_0008939 (SeedPlants) Phylogenetic Tree(s): OG_06_0008939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00217510
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00101790 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 Archaeplastida
AT1G51680 4CL1, AT4CL1, 4CL.1 4-coumarate:CoA ligase 1 0.02 Archaeplastida
AT1G62940 ACOS5 acyl-CoA synthetase 5 0.12 Archaeplastida
GSVIVT01010497001 No alias Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase 0.08 Archaeplastida
GSVIVT01029182001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
Gb_19726 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_41091 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
LOC_Os02g08100.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
LOC_Os03g04000.1 No alias OPC-8:CoA synthetase 0.03 Archaeplastida
LOC_Os04g24530.1 No alias acyl-CoA synthetase (ACS5) 0.08 Archaeplastida
LOC_Os08g14760.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
MA_109119g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
MA_20580g0050 No alias OPC-8:CoA synthetase 0.02 Archaeplastida
MA_8946476g0010 No alias acyl-CoA synthetase (ACS5) 0.05 Archaeplastida
Mp5g01200.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
Pp3c18_6360V3.1 No alias 4-coumarate:CoA ligase 3 0.02 Archaeplastida
Pp3c3_37980V3.1 No alias acyl-CoA synthetase 5 0.03 Archaeplastida
Smo177466 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo181279 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g088710.3.1 No alias acyl-CoA synthetase (ACS5) 0.11 Archaeplastida
Solyc03g097030.3.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
Solyc06g068650.4.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
Solyc07g008360.2.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
Solyc12g094520.2.1 No alias OPC-8:CoA synthetase 0.02 Archaeplastida
Zm00001e000421_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e008138_P001 No alias acyl-CoA synthetase (ACS5) 0.07 Archaeplastida
Zm00001e016374_P001 No alias acyl-CoA synthetase (ACS5) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 5 125
IPR025110 AMP-bd_C 165 195
No external refs found!