Solyc05g051070.3.1

Description : component ISY1/MAC8 of non-snRNP MOS4-associated complex

Gene families : OG0001649 (Archaeplastida) Phylogenetic Tree(s): OG0001649_tree ,
OG_05_0004841 (LandPlants) Phylogenetic Tree(s): OG_05_0004841_tree ,
OG_06_0005338 (SeedPlants) Phylogenetic Tree(s): OG_06_0005338_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g051070.3.1
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AT3G18790	No alias	FUNCTIONS IN: molecular_function unknown; INVOLVED IN:...	0.03	Archaeplastida
Cpa\|evm.model.tig00000553.28	No alias	RNA processing.RNA splicing.spliceosome-associated...	0.02	Archaeplastida
Cre10.g427150	No alias	RNA processing.RNA splicing.spliceosome-associated...	0.01	Archaeplastida
Gb_22077	No alias	component ISY1/MAC8 of non-snRNP MOS4-associated complex	0.01	Archaeplastida
MA_10425996g0010	No alias	component ISY1/MAC8 of non-snRNP MOS4-associated complex	0.03	Archaeplastida
Mp2g12890.1	No alias	component ISY1/MAC8 of non-snRNP MOS4-associated complex	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000350	generation of catalytic spliceosome for second transesterification step	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0022618	ribonucleoprotein complex assembly	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071826	ribonucleoprotein complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Neighborhood
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Neighborhood
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEP	Neighborhood
CC	GO:0005694	chromosome	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006397	mRNA processing	IEP	Neighborhood
BP	GO:0006476	protein deacetylation	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
BP	GO:0016575	histone deacetylation	IEP	Neighborhood
CC	GO:0030684	preribosome	IEP	Neighborhood
CC	GO:0030688	preribosome, small subunit precursor	IEP	Neighborhood
BP	GO:0035601	protein deacylation	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
BP	GO:0098732	macromolecule deacylation	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR009360	Isy1	1	278

External Links

No external refs found!