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  5. Solyc05g051260.3.1

Solyc05g051260.3.1


Description : no description available(sp|q84wt5|xyn5l_arath : 344.0)


Gene families : OG0001243 (Archaeplastida) Phylogenetic Tree(s): OG0001243_tree ,
OG_05_0000962 (LandPlants) Phylogenetic Tree(s): OG_05_0000962_tree ,
OG_06_0002114 (SeedPlants) Phylogenetic Tree(s): OG_06_0002114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g051260.3.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00056140 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT2G14690 No alias Glycosyl hydrolase superfamily protein 0.04 Archaeplastida
AT4G33810 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
AT4G33820 No alias Glycosyl hydrolase superfamily protein 0.04 Archaeplastida
AT4G33830 No alias Glycosyl hydrolase family 10 protein 0.03 Archaeplastida
GSVIVT01037825001 No alias No description available 0.04 Archaeplastida
GSVIVT01037832001 No alias No description available 0.04 Archaeplastida
GSVIVT01037833001 No alias No description available 0.04 Archaeplastida
Gb_02219 No alias no description available(sp|q84wt5|xyn5l_arath : 355.0) 0.05 Archaeplastida
LOC_Os03g10478.1 No alias no description available(sp|q84wt5|xyn5l_arath : 394.0) 0.06 Archaeplastida
LOC_Os03g14010.1 No alias no description available(sp|q84wt5|xyn5l_arath : 305.0) 0.03 Archaeplastida
MA_604666g0010 No alias No annotation 0.02 Archaeplastida
MA_707199g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Smo420481 No alias No description available 0.04 Archaeplastida
Solyc10g055370.2.1 No alias no description available(sp|a0a1p8b8f8|xyn5_arath : 301.0) 0.04 Archaeplastida
Solyc11g043160.2.1 No alias no description available(sp|q84wt5|xyn5l_arath : 375.0) 0.01 Archaeplastida
Zm00001e000757_P001 No alias no description available(sp|q84wt5|xyn5l_arath : 397.0) 0.04 Archaeplastida
Zm00001e038773_P006 No alias no description available(sp|q84wt5|xyn5l_arath : 388.0) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003305 CenC_carb-bd 53 156
IPR001000 GH10 230 485
No external refs found!