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  5. Solyc05g052810.4.1

Solyc05g052810.4.1


Description : component RPL35a of LSU proteome component


Gene families : OG0001985 (Archaeplastida) Phylogenetic Tree(s): OG0001985_tree ,
OG_05_0109085 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0086914 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g052810.4.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00195890 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
AT1G07070 No alias Ribosomal protein L35Ae family protein 0.21 Archaeplastida
AT1G41880 No alias Ribosomal protein L35Ae family protein 0.19 Archaeplastida
AT1G74270 No alias Ribosomal protein L35Ae family protein 0.21 Archaeplastida
AT3G55750 No alias Ribosomal protein L35Ae family protein 0.09 Archaeplastida
Cpa|evm.model.tig00020723.23 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
Cre10.g459250 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.36 Archaeplastida
GSVIVT01016386001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
GSVIVT01034025001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
Gb_35488 No alias component RPL35a of LSU proteome component 0.17 Archaeplastida
LOC_Os02g54470.1 No alias component RPL35a of LSU proteome component 0.28 Archaeplastida
LOC_Os05g48220.1 No alias component RPL35a of LSU proteome component 0.02 Archaeplastida
LOC_Os05g48310.1 No alias component RPL35a of LSU proteome component 0.02 Archaeplastida
MA_79041g0010 No alias component RPL35a of LSU proteome component 0.08 Archaeplastida
Mp1g11470.1 No alias component RPL35a of LSU proteome component 0.29 Archaeplastida
Pp3c11_9630V3.1 No alias Ribosomal protein L35Ae family protein 0.29 Archaeplastida
Pp3c13_8360V3.1 No alias Ribosomal protein L35Ae family protein 0.31 Archaeplastida
Pp3c1_4030V3.1 No alias Ribosomal protein L35Ae family protein 0.15 Archaeplastida
Pp3c3_3480V3.1 No alias Ribosomal protein L35Ae family protein 0.28 Archaeplastida
Pp3c4_29970V3.1 No alias Ribosomal protein L35Ae family protein 0.12 Archaeplastida
Pp3c7_17970V3.1 No alias Ribosomal protein L35Ae family protein 0.32 Archaeplastida
Smo184773 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
Zm00001e009729_P001 No alias component RPL35a of LSU proteome component 0.28 Archaeplastida
Zm00001e023741_P003 No alias component RPL35a of LSU proteome component 0.18 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 12 98
No external refs found!