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  5. Solyc05g053030.1.1

Solyc05g053030.1.1


Description : glycerol-3-phosphate acyltransferase (GPAT4-8). suberin sn-glycerol-3-phosphate acyltransferase


Gene families : OG0000404 (Archaeplastida) Phylogenetic Tree(s): OG0000404_tree ,
OG_05_0000201 (LandPlants) Phylogenetic Tree(s): OG_05_0000201_tree ,
OG_06_0000196 (SeedPlants) Phylogenetic Tree(s): OG_06_0000196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g053030.1.1
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00250470 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.cuticular lipid... 0.03 Archaeplastida
AMTR_s00133p00084160 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 Archaeplastida
AT1G06520 ATGPAT1, GPAT1 glycerol-3-phosphate acyltransferase 1 0.03 Archaeplastida
AT2G38110 ATGPAT6, GPAT6 glycerol-3-phosphate acyltransferase 6 0.07 Archaeplastida
AT5G06090 ATGPAT7, GPAT7 glycerol-3-phosphate acyltransferase 7 0.05 Archaeplastida
GSVIVT01016509001 No alias Glycerol-3-phosphate acyltransferase 7 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_14173 No alias glycerol-3-phosphate acyltransferase (GPAT4-8).... 0.03 Archaeplastida
Gb_39835 No alias glycerol-3-phosphate acyltransferase (GPAT4-8) 0.03 Archaeplastida
LOC_Os01g44069.1 No alias glycerol-3-phosphate acyltransferase (GPAT) 0.03 Archaeplastida
LOC_Os03g52570.1 No alias glycerol-3-phosphate acyltransferase (GPAT4-8).... 0.02 Archaeplastida
LOC_Os05g37600.1 No alias glycerol-3-phosphate acyltransferase (GPAT4-8) 0.03 Archaeplastida
MA_10434609g0020 No alias Glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis... 0.05 Archaeplastida
MA_75104g0010 No alias glycerol-3-phosphate acyltransferase (GPAT4-8).... 0.04 Archaeplastida
Mp4g03780.1 No alias glycerol-3-phosphate acyltransferase (GPAT4-8).... 0.03 Archaeplastida
Pp3c6_29200V3.1 No alias glycerol-3-phosphate acyltransferase 6 0.02 Archaeplastida
Pp3c7_7840V3.1 No alias glycerol-3-phosphate acyltransferase 6 0.03 Archaeplastida
Solyc04g011600.4.1 No alias glycerol-3-phosphate acyltransferase (GPAT4-8). suberin... 0.07 Archaeplastida
Zm00001e004790_P001 No alias glycerol-3-phosphate acyltransferase (GPAT4-8).... 0.03 Archaeplastida
Zm00001e018205_P001 No alias Probable glycerol-3-phosphate acyltransferase 2... 0.04 Archaeplastida
Zm00001e026933_P001 No alias glycerol-3-phosphate acyltransferase (GPAT4-8) 0.05 Archaeplastida
Zm00001e027934_P001 No alias glycerol-3-phosphate acyltransferase (GPAT) 0.03 Archaeplastida
Zm00001e031821_P002 No alias glycerol-3-phosphate acyltransferase (GPAT4-8). suberin... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!