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  5. Solyc05g054190.4.1

Solyc05g054190.4.1


Description : CASP-like protein 2B1 OS=Vitis vinifera (sp|a7r385|csplc_vitvi : 239.0)


Gene families : OG0003273 (Archaeplastida) Phylogenetic Tree(s): OG0003273_tree ,
OG_05_0002484 (LandPlants) Phylogenetic Tree(s): OG_05_0002484_tree ,
OG_06_0002124 (SeedPlants) Phylogenetic Tree(s): OG_06_0002124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g054190.4.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g44610.1 No alias CASP-like protein 2C1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_5220g0010 No alias CASP-like protein 2BC2 OS=Picea sitchensis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006282 regulation of DNA repair IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:2001020 regulation of response to DNA damage stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 26 173
No external refs found!