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  5. Solyc05g055030.2.1

Solyc05g055030.2.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055030.2.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00009p00263240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00038p00150140 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00048p00210040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00068p00092800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00091p00025820 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.03 Archaeplastida
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.03 Archaeplastida
AT2G13960 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.03 Archaeplastida
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.03 Archaeplastida
AT3G13890 MYB26, ATMYB26, MS35 myb domain protein 26 0.06 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.02 Archaeplastida
AT3G50060 MYB77 myb domain protein 77 0.04 Archaeplastida
AT5G23000 MYB37, RAX1, ATMYB37 myb domain protein 37 0.04 Archaeplastida
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.02 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.02 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.04 Archaeplastida
Cpa|evm.model.tig00000663.2 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Cre16.g677382 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01000219001 No alias No description available 0.05 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01004317001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01013735001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01016768001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.14 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01026868001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01027493001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028171001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01029145001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.09 Archaeplastida
GSVIVT01035462001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_20309 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_24073 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_24641 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_34464 No alias Transcription factor GAMYB OS=Oryza sativa subsp.... 0.03 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g46780.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os02g54520.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g51110.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g38740.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g49310.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os07g37210.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g43580.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g33150.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g33800.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.1 Archaeplastida
MA_10425867g0020 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10426901g0020 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10434028g0010 No alias transcription factor (MYB) 0.07 Archaeplastida
MA_10435612g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_137453g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_139238g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_1589g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_162812g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_199974g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_30848g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_308669g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_31666g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_499305g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_52293g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_6393g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_82197g0010 No alias transcription factor (MYB) 0.09 Archaeplastida
MA_8464929g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_89683g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9483804g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_95226g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_95747g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp1g09420.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp3g23170.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c9_10290V3.1 No alias myb domain protein 55 0.04 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo84195 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo84369 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Smo90153 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc01g009650.1.1 No alias transcription factor (MYB) 0.1 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g093930.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc04g014470.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g007160.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g009230.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc12g099140.2.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e001399_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001404_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001409_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e006078_P001 No alias Transcription factor GAMYB OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e010251_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e015145_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e016072_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e017470_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e018193_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e019501_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e023024_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e024682_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e028085_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e032298_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e034807_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e035619_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035652_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e038287_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!