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  5. Solyc05g055750.3.1

Solyc05g055750.3.1


Description : transcription factor (WRKY)


Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000250 (LandPlants) Phylogenetic Tree(s): OG_05_0000250_tree ,
OG_06_0086944 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055750.3.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00229970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
AMTR_s00013p00160270 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
AMTR_s00015p00181570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
AMTR_s00032p00016380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
AMTR_s00053p00025460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.02 Archaeplastida
AMTR_s00065p00201830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
AT1G30650 WRKY14, AR411, ATWRKY14 WRKY DNA-binding protein 14 0.03 Archaeplastida
AT2G44745 No alias WRKY family transcription factor 0.02 Archaeplastida
AT3G56390 No alias BEST Arabidopsis thaliana protein match is: WRKY... 0.01 Archaeplastida
AT4G04450 WRKY42, AtWRKY42 WRKY family transcription factor 0.04 Archaeplastida
GSVIVT01011356001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
GSVIVT01021397001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
GSVIVT01026969001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.02 Archaeplastida
Gb_40261 No alias transcription factor (WRKY) 0.02 Archaeplastida
Gb_41027 No alias transcription factor (WRKY) 0.02 Archaeplastida
LOC_Os01g18584.1 No alias transcription factor (WRKY) 0.04 Archaeplastida
LOC_Os02g53100.1 No alias transcription factor (WRKY) 0.02 Archaeplastida
LOC_Os03g20550.1 No alias transcription factor (WRKY) 0.02 Archaeplastida
LOC_Os05g40080.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
LOC_Os07g02060.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
LOC_Os10g42850.1 No alias transcription factor (WRKY) 0.02 Archaeplastida
LOC_Os11g29870.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
MA_10428091g0010 No alias transcription factor (WRKY) 0.01 Archaeplastida
MA_124797g0010 No alias transcription factor (WRKY) 0.02 Archaeplastida
MA_212937g0010 No alias transcription factor (WRKY) 0.03 Archaeplastida
MA_310991g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c13_10830V3.1 No alias WRKY family transcription factor 0.02 Archaeplastida
Pp3c14_17020V3.1 No alias WRKY DNA-binding protein 7 0.04 Archaeplastida
Pp3c7_7550V3.1 No alias WRKY DNA-binding protein 11 0.02 Archaeplastida
Smo77979 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.02 Archaeplastida
Smo92733 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.02 Archaeplastida
Solyc06g048870.3.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e002502_P001 No alias transcription factor (WRKY) 0.02 Archaeplastida
Zm00001e016343_P002 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e016622_P001 No alias transcription factor (WRKY) 0.02 Archaeplastida
Zm00001e017439_P001 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e018502_P001 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e025758_P001 No alias transcription factor (WRKY) 0.02 Archaeplastida
Zm00001e026554_P001 No alias transcription factor (WRKY) 0.05 Archaeplastida
Zm00001e029049_P001 No alias transcription factor (WRKY) 0.02 Archaeplastida
Zm00001e029445_P001 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e032453_P001 No alias transcription factor (WRKY) 0.05 Archaeplastida
Zm00001e040369_P001 No alias transcription factor (WRKY) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR003657 WRKY_dom 70 126
IPR003657 WRKY_dom 254 311
No external refs found!