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  5. Solyc06g008200.3.1

Solyc06g008200.3.1


Description : PHR1 transcription factor involved in proline synthesis regulation. G2-like GARP transcription factor. transcription factor (PHR1)


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g008200.3.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00190540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT5G29000 PHL1 Homeodomain-like superfamily protein 0.04 Archaeplastida
GSVIVT01022645001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os05g41240.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c26_3290V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c26_3820V3.1 No alias myb-like HTH transcriptional regulator family protein 0.04 Archaeplastida
Solyc05g051060.3.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc06g066340.4.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc11g022470.2.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Zm00001e001526_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e030364_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e033757_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0030677 ribonuclease P complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1902555 endoribonuclease complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
CC GO:1905348 endonuclease complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 265 316
IPR025756 Myb_CC_LHEQLE 348 395
No external refs found!