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  5. Solyc06g008260.3.1

Solyc06g008260.3.1


Description : component RPL14 of LSU proteome component


Gene families : OG0002563 (Archaeplastida) Phylogenetic Tree(s): OG0002563_tree ,
OG_05_0002861 (LandPlants) Phylogenetic Tree(s): OG_05_0002861_tree ,
OG_06_0003445 (SeedPlants) Phylogenetic Tree(s): OG_06_0003445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g008260.3.1
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00164470 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 Archaeplastida
AMTR_s00067p00096180 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.26 Archaeplastida
AT2G20450 No alias Ribosomal protein L14 0.2 Archaeplastida
AT4G27090 No alias Ribosomal protein L14 0.3 Archaeplastida
Cpa|evm.model.tig00000194.50 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.36 Archaeplastida
Cre17.g701200 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.31 Archaeplastida
GSVIVT01012876001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
GSVIVT01027844001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.36 Archaeplastida
Gb_21078 No alias component RPL14 of LSU proteome component 0.19 Archaeplastida
LOC_Os02g40880.1 No alias component RPL14 of LSU proteome component 0.34 Archaeplastida
MA_10433933g0010 No alias component RPL14 of LSU proteome component 0.05 Archaeplastida
MA_10434733g0010 No alias component RPL14 of LSU proteome component 0.23 Archaeplastida
MA_99106g0010 No alias component RPL14 of LSU proteome component 0.27 Archaeplastida
Mp8g17070.1 No alias component RPL14 of LSU proteome component 0.39 Archaeplastida
Pp3c15_5860V3.1 No alias Ribosomal protein L14 0.35 Archaeplastida
Pp3c20_860V3.1 No alias Ribosomal protein L14 0.29 Archaeplastida
Pp3c23_22060V3.1 No alias Ribosomal protein L14 0.27 Archaeplastida
Pp3c24_20890V3.1 No alias Ribosomal protein L14 0.41 Archaeplastida
Pp3c8_25050V3.1 No alias Ribosomal protein L14 0.05 Archaeplastida
Smo403602 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
Zm00001e010296_P001 No alias component RPL14 of LSU proteome component 0.37 Archaeplastida
Zm00001e034932_P003 No alias component RPL14 of LSU proteome component 0.41 Archaeplastida
Zm00001e041233_P002 No alias component RPL14 of LSU proteome component 0.33 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
InterPro domains Description Start Stop
IPR002784 Ribosomal_L14e_dom 45 117
No external refs found!