Coexpression cluster: Cluster_243 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043632 modification-dependent macromolecule catabolic process 6.76% (5/74) 5.04 0.0 3.7e-05
GO:0006511 ubiquitin-dependent protein catabolic process 6.76% (5/74) 5.04 0.0 3.7e-05
GO:0019941 modification-dependent protein catabolic process 6.76% (5/74) 5.04 0.0 3.7e-05
GO:0044265 cellular macromolecule catabolic process 6.76% (5/74) 4.83 1e-06 4.6e-05
GO:0051603 proteolysis involved in cellular protein catabolic process 6.76% (5/74) 4.85 1e-06 5.5e-05
GO:0009057 macromolecule catabolic process 6.76% (5/74) 4.34 5e-06 0.00021
GO:0043170 macromolecule metabolic process 24.32% (18/74) 1.63 1.2e-05 0.000425
GO:0010498 proteasomal protein catabolic process 2.7% (2/74) 7.85 2.8e-05 0.000758
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 2.7% (2/74) 7.85 2.8e-05 0.000758
GO:0044248 cellular catabolic process 6.76% (5/74) 3.73 4e-05 0.000811
GO:0006508 proteolysis 9.46% (7/74) 2.93 3.9e-05 0.00086
GO:0030163 protein catabolic process 2.7% (2/74) 7.53 4.6e-05 0.000873
GO:0006807 nitrogen compound metabolic process 24.32% (18/74) 1.51 3.9e-05 0.000944
GO:1901575 organic substance catabolic process 6.76% (5/74) 3.55 7.2e-05 0.001252
GO:0009056 catabolic process 6.76% (5/74) 3.5 8.4e-05 0.001378
GO:0044237 cellular metabolic process 24.32% (18/74) 1.41 9.8e-05 0.001415
GO:0017056 structural constituent of nuclear pore 2.7% (2/74) 7.04 9.7e-05 0.001486
GO:0019538 protein metabolic process 18.92% (14/74) 1.66 0.000111 0.001511
GO:0005198 structural molecule activity 8.11% (6/74) 2.89 0.000166 0.001564
GO:0034641 cellular nitrogen compound metabolic process 13.51% (10/74) 2.06 0.000136 0.001588
GO:0006289 nucleotide-excision repair 2.7% (2/74) 6.68 0.000166 0.001625
GO:0003684 damaged DNA binding 2.7% (2/74) 6.68 0.000166 0.001625
GO:0044260 cellular macromolecule metabolic process 18.92% (14/74) 1.63 0.000136 0.00166
GO:0044238 primary metabolic process 25.68% (19/74) 1.3 0.000157 0.001673
GO:0032991 protein-containing complex 12.16% (9/74) 2.19 0.00015 0.001674
GO:0003674 molecular_function 56.76% (42/74) 0.68 0.000133 0.001715
GO:0019773 proteasome core complex, alpha-subunit complex 2.7% (2/74) 6.53 0.000207 0.001879
GO:0071704 organic substance metabolic process 25.68% (19/74) 1.24 0.000266 0.002328
GO:0005643 nuclear pore 2.7% (2/74) 6.26 0.000303 0.002558
GO:1901564 organonitrogen compound metabolic process 18.92% (14/74) 1.43 0.000563 0.004601
GO:0044424 intracellular part 13.51% (10/74) 1.77 0.000645 0.005099
GO:0044464 cell part 13.51% (10/74) 1.72 0.000863 0.00587
GO:0004298 threonine-type endopeptidase activity 2.7% (2/74) 5.53 0.000862 0.006033
GO:0005839 proteasome core complex 2.7% (2/74) 5.53 0.000862 0.006033
GO:0070003 threonine-type peptidase activity 2.7% (2/74) 5.53 0.000862 0.006033
GO:0090304 nucleic acid metabolic process 8.11% (6/74) 2.4 0.000965 0.006388
GO:0009987 cellular process 24.32% (18/74) 1.15 0.00084 0.006433
GO:0005488 binding 35.14% (26/74) 0.81 0.001836 0.011835
GO:0009451 RNA modification 2.7% (2/74) 4.85 0.002212 0.013551
GO:0008915 lipid-A-disaccharide synthase activity 1.35% (1/74) 8.85 0.002172 0.013643
GO:0008152 metabolic process 28.38% (21/74) 0.9 0.002774 0.016575
GO:0003676 nucleic acid binding 13.51% (10/74) 1.45 0.003457 0.020166
GO:1901565 organonitrogen compound catabolic process 2.7% (2/74) 4.49 0.003612 0.020578
GO:0006139 nucleobase-containing compound metabolic process 8.11% (6/74) 2.01 0.003815 0.021243
GO:0043043 peptide biosynthetic process 5.41% (4/74) 2.4 0.00702 0.030173
GO:0009058 biosynthetic process 9.46% (7/74) 1.65 0.006983 0.030551
GO:1901360 organic cyclic compound metabolic process 8.11% (6/74) 1.84 0.006751 0.030628
GO:1901269 lipooligosaccharide metabolic process 1.35% (1/74) 7.26 0.006501 0.03063
GO:1901271 lipooligosaccharide biosynthetic process 1.35% (1/74) 7.26 0.006501 0.03063
GO:0046493 lipid A metabolic process 1.35% (1/74) 7.26 0.006501 0.03063
GO:0009245 lipid A biosynthetic process 1.35% (1/74) 7.26 0.006501 0.03063
GO:0003735 structural constituent of ribosome 5.41% (4/74) 2.41 0.006951 0.030961
GO:0006518 peptide metabolic process 5.41% (4/74) 2.37 0.007592 0.031002
GO:0004175 endopeptidase activity 4.05% (3/74) 2.92 0.007359 0.031085
GO:0009059 macromolecule biosynthetic process 6.76% (5/74) 2.03 0.00776 0.031169
GO:0006412 translation 5.41% (4/74) 2.42 0.006745 0.031179
GO:0043604 amide biosynthetic process 5.41% (4/74) 2.38 0.007519 0.031223
GO:0046483 heterocycle metabolic process 8.11% (6/74) 1.89 0.005743 0.031265
GO:0005840 ribosome 5.41% (4/74) 2.46 0.006152 0.031402
GO:0034645 cellular macromolecule biosynthetic process 6.76% (5/74) 2.11 0.006061 0.031595
GO:1990904 ribonucleoprotein complex 5.41% (4/74) 2.3 0.008909 0.031633
GO:0033588 Elongator holoenzyme complex 1.35% (1/74) 6.85 0.008659 0.031663
GO:0002098 tRNA wobble uridine modification 1.35% (1/74) 6.85 0.008659 0.031663
GO:0002097 tRNA wobble base modification 1.35% (1/74) 6.85 0.008659 0.031663
GO:0006725 cellular aromatic compound metabolic process 8.11% (6/74) 1.87 0.005965 0.031768
GO:0006281 DNA repair 2.7% (2/74) 3.82 0.008859 0.031918
GO:0043228 non-membrane-bounded organelle 5.41% (4/74) 2.32 0.008507 0.032566
GO:0043232 intracellular non-membrane-bounded organelle 5.41% (4/74) 2.32 0.008507 0.032566
GO:0043603 cellular amide metabolic process 5.41% (4/74) 2.33 0.008428 0.033305
GO:0070011 peptidase activity, acting on L-amino acid peptides 5.41% (4/74) 2.27 0.009577 0.033519
GO:0033554 cellular response to stress 2.7% (2/74) 3.7 0.010495 0.035224
GO:0051716 cellular response to stimulus 2.7% (2/74) 3.7 0.010495 0.035224
GO:0006974 cellular response to DNA damage stimulus 2.7% (2/74) 3.7 0.010495 0.035224
GO:0008233 peptidase activity 5.41% (4/74) 2.19 0.01158 0.038339
GO:0016070 RNA metabolic process 5.41% (4/74) 2.19 0.011774 0.038463
GO:0044249 cellular biosynthetic process 8.11% (6/74) 1.63 0.012861 0.041461
GO:0044271 cellular nitrogen compound biosynthetic process 6.76% (5/74) 1.83 0.013532 0.043057
GO:0005515 protein binding 13.51% (10/74) 1.14 0.014482 0.045487
GO:1901576 organic substance biosynthetic process 8.11% (6/74) 1.56 0.015966 0.049513
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_79 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_80 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.051 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_197 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_242 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_262 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_27 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_228 0.043 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_232 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_263 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.03 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_40 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_216 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_276 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_329 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_110 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_122 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.034 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_322 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_352 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_12 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.031 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_166 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_168 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_7 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_109 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_124 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_133 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_204 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_241 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_259 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_286 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_479 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_219 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_293 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_346 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.032 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_23 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_93 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_264 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_284 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.036 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_152 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_195 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_218 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_247 0.034 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_50 0.034 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.044 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_121 0.021 Archaeplastida Compare
Sequences (74) (download table)

InterPro Domains

GO Terms

Family Terms