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  4. Sequence
  5. Solyc06g009050.3.1

Solyc06g009050.3.1


Description : no hits & (original description: none)


Gene families : OG0000065 (Archaeplastida) Phylogenetic Tree(s): OG0000065_tree ,
OG_05_0000256 (LandPlants) Phylogenetic Tree(s): OG_05_0000256_tree ,
OG_06_0002535 (SeedPlants) Phylogenetic Tree(s): OG_06_0002535_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g009050.3.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G09740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 Archaeplastida
AT3G25930 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.04 Archaeplastida
AT3G58450 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.04 Archaeplastida
AT3G62550 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.05 Archaeplastida
Cre13.g565250 No alias No description available 0.01 Archaeplastida
GSVIVT01000443001 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01011877001 No alias Universal stress protein A-like protein OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01017725001 No alias No description available 0.03 Archaeplastida
GSVIVT01024846001 No alias No description available 0.03 Archaeplastida
GSVIVT01031228001 No alias No description available 0.02 Archaeplastida
Gb_05132 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_20328 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_20331 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_24984 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_32427 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_33860 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_37413 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g32780.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g28740.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10063081g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10426703g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10437265g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_139433g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_188861g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_32640g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_34981g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_57598g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_61335g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7063g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_93977g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c20_18710V3.1 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 Archaeplastida
Pp3c8_12890V3.1 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 Archaeplastida
Smo79236 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e005689_P006 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016001_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e018234_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e026208_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027691_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e040676_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0004575 sucrose alpha-glucosidase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0015926 glucosidase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0090599 alpha-glucosidase activity IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006016 UspA 8 155
No external refs found!