Solyc06g009220.4.1

Description : starch debranching enzyme. starch-debranching isoamylase-type enzyme

Gene families : OG0001068 (Archaeplastida) Phylogenetic Tree(s): OG0001068_tree ,
OG_05_0002327 (LandPlants) Phylogenetic Tree(s): OG_05_0002327_tree ,
OG_06_0002831 (SeedPlants) Phylogenetic Tree(s): OG_06_0002831_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g009220.4.1
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00166810	evm_27.TU.AmTr_v1...	Carbohydrate metabolism.starch...	0.03	Archaeplastida
AT1G03310	DBE1, ATISA2, BE2, ISA2	debranching enzyme 1	0.05	Archaeplastida
AT4G09020	ATISA3, ISA3	isoamylase 3	0.03	Archaeplastida
Cre03.g207713	No alias	Carbohydrate metabolism.starch...	0.02	Archaeplastida
Cre17.g698850	No alias	Isoamylase 2, chloroplastic OS=Arabidopsis thaliana	0.01	Archaeplastida
GSVIVT01035168001	No alias	Carbohydrate metabolism.starch...	0.07	Archaeplastida
LOC_Os05g32710.1	No alias	starch debranching enzyme. starch-debranching...	0.02	Archaeplastida
MA_10431226g0020	No alias	starch debranching enzyme. starch-debranching...	0.02	Archaeplastida
Zm00001e021910_P001	No alias	starch debranching enzyme. starch-debranching...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Neighborhood
BP	GO:0000105	histidine biosynthetic process	IEP	Neighborhood
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Neighborhood
MF	GO:0003989	acetyl-CoA carboxylase activity	IEP	Neighborhood
MF	GO:0004133	glycogen debranching enzyme activity	IEP	Neighborhood
MF	GO:0004134	4-alpha-glucanotransferase activity	IEP	Neighborhood
MF	GO:0004427	inorganic diphosphatase activity	IEP	Neighborhood
MF	GO:0004635	phosphoribosyl-AMP cyclohydrolase activity	IEP	Neighborhood
MF	GO:0004645	phosphorylase activity	IEP	Neighborhood
MF	GO:0004673	protein histidine kinase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006534	cysteine metabolic process	IEP	Neighborhood
BP	GO:0006547	histidine metabolic process	IEP	Neighborhood
BP	GO:0006553	lysine metabolic process	IEP	Neighborhood
MF	GO:0008184	glycogen phosphorylase activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Neighborhood
MF	GO:0008837	diaminopimelate epimerase activity	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009069	serine family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Neighborhood
BP	GO:0009085	lysine biosynthetic process	IEP	Neighborhood
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	Neighborhood
BP	GO:0009092	homoserine metabolic process	IEP	Neighborhood
BP	GO:0009314	response to radiation	IEP	Neighborhood
CC	GO:0009317	acetyl-CoA carboxylase complex	IEP	Neighborhood
BP	GO:0009416	response to light stimulus	IEP	Neighborhood
BP	GO:0009581	detection of external stimulus	IEP	Neighborhood
BP	GO:0009582	detection of abiotic stimulus	IEP	Neighborhood
BP	GO:0009583	detection of light stimulus	IEP	Neighborhood
BP	GO:0009584	detection of visible light	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
MF	GO:0009975	cyclase activity	IEP	Neighborhood
MF	GO:0009976	tocopherol cyclase activity	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016421	CoA carboxylase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Neighborhood
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Neighborhood
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
MF	GO:0016854	racemase and epimerase activity	IEP	Neighborhood
MF	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives	IEP	Neighborhood
MF	GO:0016872	intramolecular lyase activity	IEP	Neighborhood
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	Neighborhood
BP	GO:0018298	protein-chromophore linkage	IEP	Neighborhood
MF	GO:0019238	cyclohydrolase activity	IEP	Neighborhood
BP	GO:0019346	transsulfuration	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
MF	GO:0036361	racemase activity, acting on amino acids and derivatives	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0046451	diaminopimelate metabolic process	IEP	Neighborhood
MF	GO:0047661	amino-acid racemase activity	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0050667	homocysteine metabolic process	IEP	Neighborhood
BP	GO:0051606	detection of stimulus	IEP	Neighborhood
MF	GO:0051920	peroxiredoxin activity	IEP	Neighborhood
BP	GO:0052803	imidazole-containing compound metabolic process	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Neighborhood
MF	GO:2001070	starch binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004193	Glyco_hydro_13_N	94	187
IPR006047	Glyco_hydro_13_cat_dom	259	615

External Links

No external refs found!

Solyc06g009220.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation