1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g036290.3.1

Solyc06g036290.3.1


Description : chaperone (Hsp90)


Gene families : OG0000294 (Archaeplastida) Phylogenetic Tree(s): OG0000294_tree ,
OG_05_0000736 (LandPlants) Phylogenetic Tree(s): OG_05_0000736_tree ,
OG_06_0001065 (SeedPlants) Phylogenetic Tree(s): OG_06_0001065_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g036290.3.1
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00118120 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.04 Archaeplastida
AT5G52640 HSP81-1, HSP83,... heat shock protein 90.1 0.11 Archaeplastida
AT5G56010 HSP81-3,... heat shock protein 81-3 0.17 Archaeplastida
AT5G56030 HSP81-2, ERD8,... heat shock protein 81-2 0.06 Archaeplastida
Cpa|evm.model.tig00000989.4 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cpa|evm.model.tig00021126.11 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Cre02.g080650 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
Cre09.g386750 No alias External stimuli response.temperature.Hsp... 0.16 Archaeplastida
Cre12.g514850 No alias External stimuli response.temperature.Hsp... 0.09 Archaeplastida
GSVIVT01003469001 No alias External stimuli response.temperature.Hsp... 0.13 Archaeplastida
GSVIVT01019407001 No alias External stimuli response.temperature.Hsp... 0.09 Archaeplastida
GSVIVT01028856001 No alias External stimuli response.temperature.Hsp... 0.07 Archaeplastida
GSVIVT01030056001 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
Gb_07213 No alias chaperone (Hsp90) 0.07 Archaeplastida
Gb_07214 No alias chaperone (Hsp90) 0.03 Archaeplastida
Gb_07218 No alias chaperone (Hsp90) 0.08 Archaeplastida
Gb_24462 No alias chaperone (Hsp90) 0.07 Archaeplastida
Gb_35163 No alias chaperone (Hsp90) 0.11 Archaeplastida
Gb_39845 No alias chaperone (Hsp90) 0.03 Archaeplastida
LOC_Os04g01740.1 No alias chaperone (Hsp90) 0.16 Archaeplastida
LOC_Os06g50300.1 No alias chaperone (Hsp90) 0.03 Archaeplastida
LOC_Os08g39140.1 No alias chaperone (Hsp90) 0.17 Archaeplastida
LOC_Os09g29840.1 No alias chaperone (Hsp90) 0.06 Archaeplastida
LOC_Os09g30412.1 No alias chaperone (Hsp90) 0.05 Archaeplastida
LOC_Os09g30418.1 No alias chaperone (Hsp90) 0.07 Archaeplastida
LOC_Os12g32986.1 No alias chaperone (Hsp90) 0.16 Archaeplastida
MA_10434030g0010 No alias chaperone (Hsp90) 0.08 Archaeplastida
MA_10861g0010 No alias chaperone (Hsp90) 0.03 Archaeplastida
Mp1g26610.1 No alias chaperone (Hsp90) 0.06 Archaeplastida
Mp2g04900.1 No alias chaperone (Hsp90) 0.04 Archaeplastida
Pp3c14_3360V3.1 No alias Chaperone protein htpG family protein 0.11 Archaeplastida
Pp3c15_12510V3.1 No alias heat shock protein 90.1 0.11 Archaeplastida
Pp3c15_4270V3.1 No alias HEAT SHOCK PROTEIN 81.4 0.09 Archaeplastida
Pp3c15_6620V3.1 No alias heat shock protein 90.1 0.12 Archaeplastida
Pp3c15_6622V3.1 No alias heat shock protein 90.1 0.09 Archaeplastida
Pp3c19_15000V3.1 No alias Chaperone protein htpG family protein 0.08 Archaeplastida
Pp3c4_810V3.1 No alias Chaperone protein htpG family protein 0.09 Archaeplastida
Pp3c9_6640V3.1 No alias HEAT SHOCK PROTEIN 81.4 0.1 Archaeplastida
Pp3c9_6690V3.1 No alias HEAT SHOCK PROTEIN 81.4 0.03 Archaeplastida
Smo151384 No alias External stimuli response.temperature.Hsp... 0.15 Archaeplastida
Smo267300 No alias External stimuli response.temperature.Hsp... 0.15 Archaeplastida
Smo271484 No alias External stimuli response.temperature.Hsp... 0.16 Archaeplastida
Smo440901 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
Solyc12g015880.2.1 No alias chaperone (Hsp90) 0.04 Archaeplastida
Zm00001e003458_P001 No alias chaperone (Hsp90) 0.17 Archaeplastida
Zm00001e024358_P002 No alias chaperone (Hsp90) 0.09 Archaeplastida
Zm00001e030170_P002 No alias chaperone (Hsp90) 0.05 Archaeplastida
Zm00001e034447_P002 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e034499_P001 No alias chaperone (Hsp90) 0.11 Archaeplastida
Zm00001e040472_P001 No alias chaperone (Hsp90) 0.17 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003594 HATPase_C 32 186
IPR001404 Hsp90_fam 189 684
No external refs found!