Solyc06g051570.4.1

Description : transcriptional repressor (NF-X1)

Gene families : OG0001605 (Archaeplastida) Phylogenetic Tree(s): OG0001605_tree ,
OG_05_0006363 (LandPlants) Phylogenetic Tree(s): OG_05_0006363_tree ,
OG_06_0006575 (SeedPlants) Phylogenetic Tree(s): OG_06_0006575_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g051570.4.1
Cluster	HCCA: Cluster_173

Target	Alias	Description	ECC score	Gene Family Method
AT5G05660	ATNFXL2	sequence-specific DNA binding transcription factors;zinc...	0.04	Archaeplastida
Cpa\|evm.model.tig00000865.37	No alias	NF-X1-type zinc finger protein NFXL2 OS=Arabidopsis thaliana	0.02	Archaeplastida
Mp1g08660.1	No alias	transcriptional repressor (NF-X1)	0.02	Archaeplastida
Mp8g16170.1	No alias	transcriptional repressor (NF-X1)	0.04	Archaeplastida
Zm00001e025830_P002	No alias	transcriptional repressor (NF-X1)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003714	transcription corepressor activity	IEP	Neighborhood
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Neighborhood
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005875	microtubule associated complex	IEP	Neighborhood
BP	GO:0006479	protein methylation	IEP	Neighborhood
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
BP	GO:0007010	cytoskeleton organization	IEP	Neighborhood
BP	GO:0007051	spindle organization	IEP	Neighborhood
BP	GO:0007062	sister chromatid cohesion	IEP	Neighborhood
BP	GO:0007064	mitotic sister chromatid cohesion	IEP	Neighborhood
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Neighborhood
MF	GO:0008134	transcription factor binding	IEP	Neighborhood
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008213	protein alkylation	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
BP	GO:0016571	histone methylation	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
MF	GO:0017025	TBP-class protein binding	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0018022	peptidyl-lysine methylation	IEP	Neighborhood
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Neighborhood
BP	GO:0022402	cell cycle process	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0034968	histone lysine methylation	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0042054	histone methyltransferase activity	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
BP	GO:0051225	spindle assembly	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood
CC	GO:0070652	HAUS complex	IEP	Neighborhood
BP	GO:0070925	organelle assembly	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1903047	mitotic cell cycle process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000967	Znf_NFX1	233	251
IPR000967	Znf_NFX1	393	411
IPR000967	Znf_NFX1	181	198
IPR000967	Znf_NFX1	286	304
IPR000967	Znf_NFX1	487	497
IPR000967	Znf_NFX1	340	359
IPR000967	Znf_NFX1	506	515
IPR000967	Znf_NFX1	633	648
IPR000967	Znf_NFX1	420	438
IPR000967	Znf_NFX1	588	598

External Links

No external refs found!

Solyc06g051570.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation