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  5. Solyc06g060400.3.1

Solyc06g060400.3.1


Description : component RPL15 of LSU proteome component


Gene families : OG0002310 (Archaeplastida) Phylogenetic Tree(s): OG0002310_tree ,
OG_05_0002154 (LandPlants) Phylogenetic Tree(s): OG_05_0002154_tree ,
OG_06_0002413 (SeedPlants) Phylogenetic Tree(s): OG_06_0002413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g060400.3.1
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00023340 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
AT4G16720 No alias Ribosomal protein L23/L15e family protein 0.23 Archaeplastida
AT4G17390 No alias Ribosomal protein L23/L15e family protein 0.44 Archaeplastida
Cpa|evm.model.tig00000310.75 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
Cre02.g091100 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
GSVIVT01007404001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.37 Archaeplastida
GSVIVT01014039001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
GSVIVT01018183001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 Archaeplastida
Gb_32917 No alias component RPL15 of LSU proteome component 0.06 Archaeplastida
Gb_36986 No alias component RPL15 of LSU proteome component 0.25 Archaeplastida
LOC_Os03g40180.1 No alias component RPL15 of LSU proteome component 0.36 Archaeplastida
LOC_Os05g19370.1 No alias component RPL15 of LSU proteome component 0.42 Archaeplastida
MA_19619g0010 No alias component RPL15 of LSU proteome component 0.06 Archaeplastida
MA_29804g0010 No alias component RPL15 of LSU proteome component 0.27 Archaeplastida
Mp1g06500.1 No alias component RPL15 of LSU proteome component 0.5 Archaeplastida
Pp3c14_22920V3.1 No alias Ribosomal protein L23/L15e family protein 0.43 Archaeplastida
Pp3c17_22180V3.1 No alias Ribosomal protein L23/L15e family protein 0.28 Archaeplastida
Pp3c1_37420V3.1 No alias Ribosomal protein L23/L15e family protein 0.38 Archaeplastida
Pp3c20_2640V3.1 No alias Ribosomal protein L23/L15e family protein 0.31 Archaeplastida
Pp3c2_5780V3.1 No alias Ribosomal protein L23/L15e family protein 0.34 Archaeplastida
Pp3c8_22360V3.1 No alias Ribosomal protein L23/L15e family protein 0.4 Archaeplastida
Smo270259 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
Zm00001e010380_P001 No alias component RPL15 of LSU proteome component 0.41 Archaeplastida
Zm00001e032897_P001 No alias component RPL15 of LSU proteome component 0.45 Archaeplastida
Zm00001e034995_P001 No alias component RPL15 of LSU proteome component 0.39 Archaeplastida
Zm00001e034996_P001 No alias component RPL15 of LSU proteome component 0.39 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 2 190
No external refs found!