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  5. Solyc06g063030.3.1

Solyc06g063030.3.1


Description : SEC22-type R-type SNARE longin protein


Gene families : OG0003506 (Archaeplastida) Phylogenetic Tree(s): OG0003506_tree ,
OG_05_0003474 (LandPlants) Phylogenetic Tree(s): OG_05_0003474_tree ,
OG_06_0003456 (SeedPlants) Phylogenetic Tree(s): OG_06_0003456_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g063030.3.1
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
Cre12.g554700 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR010908 Longin_dom 38 118
IPR001388 Synaptobrevin 133 213
No external refs found!