Solyc06g066540.1.1

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000070 (SeedPlants) Phylogenetic Tree(s): OG_06_0000070_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g066540.1.1
Cluster	HCCA: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00194910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00016p00092590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00026p00180130	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor ERF084...	0.02	Archaeplastida
AMTR_s00056p00064760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00095p00094910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AT1G12890	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G15360	WIN1, SHN1	Integrase-type DNA-binding superfamily protein	0.08	Archaeplastida
AT1G64380	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G57600	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G51990	CBF4, DREB1D	C-repeat-binding factor 4	0.05	Archaeplastida
Cre14.g620500	No alias	No description available	0.02	Archaeplastida
GSVIVT01015540001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.09	Archaeplastida
GSVIVT01017315001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.06	Archaeplastida
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01035852001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
Gb_08541	No alias	transcription factor (DREB)	0.05	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Gb_24891	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.02	Archaeplastida
Gb_35633	No alias	no hits & (original description: none)	0.04	Archaeplastida
Gb_37188	No alias	transcription factor (DREB)	0.06	Archaeplastida
Gb_41433	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.05	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46410.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g49700.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os06g07030.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.08	Archaeplastida
LOC_Os08g45110.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_115502g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_24801g0010	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_4481564g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.05	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_7850076g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_924346g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
Pp3c10_11910V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c4_31920V3.1	No alias	ethylene responsive element binding factor 1	0.04	Archaeplastida
Pp3c5_880V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
Pp3c8_7340V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Smo104980	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Solyc03g005500.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.03	Archaeplastida
Solyc03g095977.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc03g116610.3.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.05	Archaeplastida
Solyc03g117130.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc11g011750.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e014008_P002	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.06	Archaeplastida
Zm00001e015327_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e018522_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e022016_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e026573_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e029041_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e030585_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.05	Archaeplastida
Zm00001e031438_P002	No alias	Ethylene-responsive transcription factor RAP2-3...	0.03	Archaeplastida
Zm00001e034242_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e036260_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
MF	GO:0016289	CoA hydrolase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	16	65

External Links

No external refs found!

Solyc06g066540.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation