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  5. Solyc06g069860.4.1

Solyc06g069860.4.1


Description : component RPL34 of LSU proteome component


Gene families : OG0001700 (Archaeplastida) Phylogenetic Tree(s): OG0001700_tree ,
OG_05_0001610 (LandPlants) Phylogenetic Tree(s): OG_05_0001610_tree ,
OG_06_0087249 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g069860.4.1
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00260490 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
AMTR_s00010p00260730 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.24 Archaeplastida
AT1G26880 No alias Ribosomal protein L34e superfamily protein 0.35 Archaeplastida
AT1G69620 RPL34 ribosomal protein L34 0.39 Archaeplastida
AT3G28900 No alias Ribosomal protein L34e superfamily protein 0.31 Archaeplastida
Cpa|evm.model.tig00000632.3 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
Cre16.g661050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.42 Archaeplastida
GSVIVT01011419001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
GSVIVT01019985001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
Gb_36060 No alias component RPL34 of LSU proteome component 0.1 Archaeplastida
LOC_Os08g06040.1 No alias component RPL34 of LSU proteome component 0.41 Archaeplastida
LOC_Os08g33920.1 No alias component RPL34 of LSU proteome component 0.15 Archaeplastida
LOC_Os09g24690.1 No alias component RPL34 of LSU proteome component 0.35 Archaeplastida
MA_109553g0010 No alias component RPL34 of LSU proteome component 0.2 Archaeplastida
MA_175574g0010 No alias component RPL34 of LSU proteome component 0.17 Archaeplastida
MA_7581523g0010 No alias component RPL34 of LSU proteome component 0.2 Archaeplastida
Mp4g17040.1 No alias component RPL34 of LSU proteome component 0.46 Archaeplastida
Pp3c11_2940V3.1 No alias Ribosomal protein L34e superfamily protein 0.29 Archaeplastida
Pp3c11_3090V3.1 No alias Ribosomal protein L34e superfamily protein 0.05 Archaeplastida
Pp3c1_1800V3.1 No alias Ribosomal protein L34e superfamily protein 0.23 Archaeplastida
Pp3c25_11980V3.1 No alias Ribosomal protein L34e superfamily protein 0.3 Archaeplastida
Pp3c2_34570V3.1 No alias Ribosomal protein L34e superfamily protein 0.18 Archaeplastida
Pp3c7_21380V3.1 No alias Ribosomal protein L34e superfamily protein 0.26 Archaeplastida
Smo113433 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
Solyc02g087930.3.1 No alias component RPL34 of LSU proteome component 0.04 Archaeplastida
Zm00001e004116_P001 No alias component RPL34 of LSU proteome component 0.33 Archaeplastida
Zm00001e021733_P002 No alias component RPL34 of LSU proteome component 0.34 Archaeplastida
Zm00001e022460_P001 No alias component RPL34 of LSU proteome component 0.03 Archaeplastida
Zm00001e034114_P001 No alias component RPL34 of LSU proteome component 0.41 Archaeplastida
Zm00001e040229_P001 No alias component RPL34 of LSU proteome component 0.33 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
InterPro domains Description Start Stop
IPR008195 Ribosomal_L34Ae 1 96
No external refs found!